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nf-core/crisprseq

A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (targeted) as well as the discovery of important genes from knock-out or activation CRISPR-Cas9 screens using CRISPR pooled DNA (screening).

crisprcrispr-analysiscrispr-casngs
This is the development version of the pipeline.
Launch development version https://github.com/nf-core/crisprseq
  • Introduction
  • Usage
  • Parameters
  • Output
  • Releases
    • 2.3.0
    • 2.2.1
    • 2.2.0
    • 2.1.1
    • 2.1.0
    • 2.0.0
    • 1.0
    • dev
Introduction Usage Parameters Output Releases
  • 2.3.0
  • 2.2.1
  • 2.2.0
  • 2.1.1
  • 2.1.0
  • 2.0.0
  • 1.0
  • dev

No nextflow_schema.json file found!

It seems like there is no nextflow_schema.json file with parameters defined for this version of the pipeline. Try a newer version.

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See the source code for this website on GitHub:
https://github.com/nf-core/website